Analysis of changes in gut microbiota of 5XFAD transgenic mice

LUOZhi-yu, CHUXing-kun, CHANGShuai-shuai, FENGYuan, YANGDa-bing, WANGXin-yi, DUXiao-guang, FENGTeng, ZHANGJing

Chinese Journal of Alzheimer's Disease and Related Disorders ›› 2021, Vol. 4 ›› Issue (3) : 179-184.

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Chinese Journal of Alzheimer's Disease and Related Disorders

Abbreviation (ISO4): Chinese Journal of Alzheimer's Disease and Related Disorders      Editor in chief: Jun WANG

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Chinese Journal of Alzheimer's Disease and Related Disorders ›› 2021, Vol. 4 ›› Issue (3) : 179-184. DOI: 10.3969/j.issn.2096-5516.2021.03.002
Research Articles

Analysis of changes in gut microbiota of 5XFAD transgenic mice

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Abstract

Objective: To explore the gut microbiota changes of 5XFAD transgenic mice of Alzheimer's disease (AD) model compared with wild-type (WT) mice and the impacts of gender difference. Methods: The feces of different gender 5XFAD and WT mice were collected, and the bacterial 16S rRNA of fecal genomic DNA was amplified by PCR and sequenced by using high-throughput sequencing methods. Then, the differential and functional analysis of the sequencing data are carried out through nf-core and the bioinformation analysis method based on the R language platform. Results: In the composition analysis, compared to WT mice, 5XFAD transgenic mice had lower abundance of Epsilonbacteraeota and Proteobacteria at the phylum level. At genus level, 5XFAD transgenic mice had higher abundance of Alistipes and Lactobacillus and lower abundance of Helicobacter. In the functional analysis, compared to WT mice, 5XFAD transgenic mice had influenced different metabolism pathways. Besides, the composition and function of microbiota was different in a gender specific manner. Conclusion: The gut microbiota of 5XFAD transgenic mice is different from that of WT mice, and the difference is affected by gender.

Key words

gut microbiota / 16S rRNA high-throughput sequencing / 5XFAD

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LUO Zhi-yu , CHU Xing-kun , CHANG Shuai-shuai , et al . Analysis of changes in gut microbiota of 5XFAD transgenic mice[J]. Chinese Journal of Alzheimer's Disease and Related Disorders. 2021, 4(3): 179-184 https://doi.org/10.3969/j.issn.2096-5516.2021.03.002

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