Analysis of Microbial Diversity in Rhizosphere Soil of Naturally Nurturing Seedlings of Dendrobium denneanum in Malipo

PENGCuixian, WANGCan, YANGYuling, LIGuilin, LILing, SONGYangmei, ZHAODawei, TAOYonghong

Chin Agric Sci Bull ›› 2026, Vol. 42 ›› Issue (11) : 84-91.

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Chin Agric Sci Bull ›› 2026, Vol. 42 ›› Issue (11) : 84-91. DOI: 10.11924/j.issn.1000-6850.casb2025-0389

Analysis of Microbial Diversity in Rhizosphere Soil of Naturally Nurturing Seedlings of Dendrobium denneanum in Malipo

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Abstract

To investigate the natural germination environment and rhizosphere microbial status of Dendrobium denneanum seedlings in Malipo, high-throughput sequencing was employed to analyze the microbial diversity and community composition differences between the rhizosphere soil of one-year-old seedlings and nearby non-germinated seedling soil. The results indicated that compared to non-germinated Dendrobium denneanum seedling soil, the diversity of bacterial and fungal communities in one-year-old Dendrobium denneanum seedling rhizosphere soil significantly decreased. At the phylum level, Proteobacteria ranked the first in bacterial abundance (SCK: 29.48%, A1: 40.23%), followed by Bacteroidota (SCK: 33.73%, A1: 19.12%), with Acidobacteriota and Planctomycetota occupying the third and fourth positions, respectively. Among fungi, Ascomycota showed the highest abundance (SCK: 45.23%, A1: 37.43%), followed by unclassified Mortierellomycota (SCK: 31.89%, A1: 48.35%), while Ciliophora and Basidiomycota ranked third and fourth. Variation analysis revealed that significant differences were found in microbial community composition between the two soil samples (bacteria: R2=0.900, P=0.001; fungi: R2=0.963, P=0.001). Soil environmental factors such as organic matter, total nitrogen, and Ca exhibited significant correlations with beneficial microbes like Mortierella and Sphingomonas. These findings provide scientific insights for developing microbial resources related to Dendrobium denneanum seed germination and analyzing interactions between orchid plants and microorganisms.

Key words

Dendrobium aurantiacum / natural seedlings / nurturing environment / rhizosphere microorganisms / diversity

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PENG Cuixian , WANG Can , YANG Yuling , et al . Analysis of Microbial Diversity in Rhizosphere Soil of Naturally Nurturing Seedlings of Dendrobium denneanum in Malipo[J]. Chinese Agricultural Science Bulletin. 2026, 42(11): 84-91 https://doi.org/10.11924/j.issn.1000-6850.casb2025-0389

References

[1]
杨增宏. 兰花-中国兰科植物集锦[M]. 北京: 中国世界语出版社, 1998.
[2]
YEUNG C E. A perspective on orchid seed and protocorm development[J]. Botanical studies, 2017, 58(1):33-33.
This perspective draws attention to the functional organization of orchid seed and protocorm during the course of development. The orchid embryos have a well-organized developmental plan generating a blue-print of a protocorm as they mature. The different phases of embryo development in orchids, i.e. histodifferentiation, storage product synthesis and accumulation, and maturation are essentially similar to other flowering plants. The protocorm is considered as a unique structure designed to establish symbiotic association with mycorrhizal fungi and with the primary goal to form a shoot apical meristem. This perspective brings forth arguments that the processes of embryo and protocorm development are highly programmed events, enhancing survival of orchid seeds and plantlets in their natural habitats. Furthermore, the ability of protocorm cells to divide, makes them ideal explants for micropropagation and transformation studies. Through seed germination and micropropagation using protocorms as explants, orchid conservation efforts are greatly enhanced.
[3]
中国植物志,被子植物门,单子叶植物纲[M]. 北京: 科学出版社, 1999:67-146.
[4]
中国科学院中国植物志编辑委员会. 中国植物志:第19卷[M]. 北京: 科学出版社, 1999:88-89.
[5]
四川省食品药品监督管理局. 四川省中药材标准[S]. 成都: 四川科学技术出版社, 2010:414-418.
[6]
四川省食品药品监督管理局. 四川省中药饮片炮制规范[S]. 成都: 四川科学技术出版社, 2016:375-376.
[7]
侯帆, 邓晓东, 杨朝洁, 等. 响应面优化叠鞘石斛酥性饼干配方及其淀粉消化特性研究[J]. 食品与发酵科技, 2022, 58(2):87-94.
[8]
高越, 郭顺星, 邢晓科. 兰科植物种子共生萌发真菌多样性及共生萌发机制研究进展[J]. 菌物学报, 2019, 38(11):1808-1825.
自然环境下,兰科植物种子细小无胚乳,需要和适宜的真菌共生才能萌发,因而与真菌有天然的共生关系。自身繁殖率低加之近年来栖息地环境破坏导致兰科植物资源更加濒危,而通过筛选适合的真菌进行种子的共生萌发可以有效地实现兰科植物的种质保育及濒危种类野生居群的生态恢复。本文对地生型、附生型以及腐生型等兰科植物已发现的萌发真菌的多样性进行了系统地梳理,发现担子菌门的胶膜菌科、角担菌科以及蜡壳耳目真菌为已报道共生萌发真菌的主要类群;同时对兰科植物种子的共生萌发机制,包括形态学机制、营养机制和分子机制等方面的相关研究进行了归纳论述,但是当前关于兰科植物和真菌互作机制方面的研究还相对较少,许多问题需要进一步明确。本文对共生萌发真菌在兰科植物保育和繁育中的应用以及共生萌发机制的研究等方面具有一定的参考价值。
[9]
张芳芳. 五唇兰根部内生细菌筛选及其促生效应研究[D]. 海口: 海南大学, 2015.
[10]
赵银. 白及优质种苗繁育技术及其促生内生菌的筛选和鉴定[D]. 杭州: 浙江大学, 2020.
[11]
WILKINSON K G, DIXON K W, SIVASITHAMPARAM K. Interaction of soil bacteria, mycorrhizal fungi and orchid seed in relation to germination of Australian orchids[J]. New phytologist, 1989, 112(3):429-435.
[12]
许鹏辉, 赵岳浩, 康泽兵, 等. 基于高通量测序分析拉萨大黄根部内生菌及根际土壤微生物多样性研究[J]. 高原科学研究, 2024, 8(2):1-13.
[13]
CHEN J W, WU Y, ZHUANG X, GUO J J, et al. Diversity analysis of leaf endophytic fungi and rhizosphere soil fungi of Korean Epimedium at different growth stages[J]. Environ microbiome, 2022, 17(1):52.
Rhizosphere fungi and endophytic fungi play key roles in plant growth and development; however, their role in the growth of Epimedium koreanum Nakai at different stages remains unclear. Here, we used the Illumina MiSeq system, a high-throughput sequencing technology, to study the endophytic fungi and rhizosphere microbiome of Korean Epimedium.
[14]
张萍, 宋希强. 兰科植物内生细菌物种多样性及其促生机理研究进展[J]. 热带亚热带植物学报, 2012, 20(1):92-98.
[15]
姚娜, 王涛, 陈燕, 等. 树兰原球茎内生细菌群落多样性及功能分析[J]. 微生物学报, 2024, 64(5):1654-1667.
[16]
梁玉琼, 王梦雪, 高世南, 等. 齿瓣石斛不同月龄幼苗根内共生真菌多样性动态变化分析[J]. 微生物学通报, 2024, 51(11):4451-4463.
[17]
WATKINSON I J, WINKEL J S B. Diversity of unique, nonmycorrhizal endophytic fungi in cultivated Phalaenopsis orchids: A pilot study[J]. Plant-environment interactions (Hoboken, N J), 2024, 5(3):10146-10146.
[18]
李爱花, 王涛, 王苗苗, 等. 滇西槽舌兰内生真菌多样性及其共生真菌对叠鞘石斛种子萌发的效应[J]. 中国农业科技导报, 2023, 25(10):91-98.
[19]
许明健, 周立香, 王卫华, 等. 天麻种子形成期不同阶段内生及根际土壤真菌筛选及多样性特征[J]. 微生物学通报, 2025, 52(9):4108-4122.
[20]
ZHANG H, WU X, Li G, et al. Interactions between arbuscular mycorrhizal fungi and phosphate-solubilizing fungus (Mortierella sp.) and their effects on Kostelelzkya virginica growth and enzyme activities of rhizosphere and bulk soils at different salinities[J]. Biology and fertility of soils, 2011, 47(5).
[21]
宁琪, 陈林, 李芳, 等. 被孢霉对土壤养分有效性和秸秆降解的影响[J]. 土壤学报, 2022, 59(1):206-217.
[22]
孟晗. 长三角地区土壤不同发育阶段微生物群落结构的变化[D]. 上海: 复旦大学, 2011.
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